I was recently looking for a method to create an application with Clojure that would allow specification of command line arguments.
I came across an excellent (http://stackoverflow.com/questions/1341154/building-a-clojure-app-with-a-command-line-interface) on Stack Overflow by (http://stackoverflow.com/users/128927/alanlcode), that provides a spectacular example. I’ve (http://gist.github.com/367681) it for reference.
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If you have any questions or thoughts, don't hesitate to reach out. You can find me as @viksit on Twitter.